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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
47900

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human APOA1 HGNC:600 (HGNC)
335 (Entrez Gene)
107680 (OMIM)
Chr11 q23-q24 Chr11:116835751-116837622 (-)
GRCh38
Amyloidosis, Familial Visceral
Apolipoprotein A-I; APOA1
Hypoalphalipoproteinemia, Primary
P02647 (UniProt | EBI)
NM_000039 (RefSeq)
mouse Apoa1 MGI:88049 (MGI)
11806 (Entrez Gene)
Gene Tree
VISTA-Point
Chr9 25.36 cM Chr9:46228580-46230466 (+)
GRCm38
OTTMUSG00000028707 (VEGA)
OTTMUSP00000036355 (VEGA)
OTTMUST00000071093 (VEGA)
rat Apoa1 25081 (Entrez Gene)
Chr8 q23-q24 P04639 (UniProt | EBI)
NM_012738 (RefSeq)
chimpanzee APOA1 451564 (Entrez Gene)
Chr11 P0DJG0 (UniProt | EBI)
rhesus macaque APOA1 696969 (Entrez Gene)
Chr14 XP_001090535 (RefSeq)
cattle APOA1 281631 (Entrez Gene)
Chr15 P15497 (UniProt | EBI)
NM_174242 (RefSeq)
dog APOA1 479427 (Entrez Gene)
Chr5 XP_536564 (RefSeq)
chicken APOA1 396536 (Entrez Gene)
Chr24 P08250 (UniProt | EBI)
NM_205525 (RefSeq)
western clawed frog apoa1 448709 (Entrez Gene)
ChrUN NP_001005127 (RefSeq)
NM_001005127 (RefSeq)
zebrafish apoa1a 30355 (Entrez Gene)
Chr5 O42363 (UniProt | EBI)
NM_131128 (RefSeq)
apoa1b 100101640 (Entrez Gene)
Chr15 NP_001093614 (RefSeq)
NM_001100144 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/23/2014
MGI 5.19
The Jackson Laboratory