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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
4761

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human IFT88 HGNC:20606 (HGNC)
8100 (Entrez Gene)
600595 (OMIM)
Chr13 q12.1 Chr13:20566446-20691437 (+)
GRCh38
Q13099 (UniProt | EBI)
NM_006531 (RefSeq)
mouse Ift88 MGI:98715 (MGI)
21821 (Entrez Gene)
Gene Tree
VISTA-Point
Chr14 30.1 cM Chr14:57424062-57517936 (+)
GRCm38
Polycystic Kidney Disease, Autosomal Recessive; ARPKD
OTTMUSG00000026733 (VEGA)
OTTMUSP00000032923 (VEGA)
OTTMUST00000065922 (VEGA)
rat Ift88 305918 (Entrez Gene)
Chr15 p12 NP_001100736 (RefSeq)
NM_001107266 (RefSeq)
chimpanzee IFT88 452461 (Entrez Gene)
Chr13 NP_001267141 (RefSeq)
NM_001280212 (RefSeq)
rhesus macaque IFT88 703874 (Entrez Gene)
Chr17 XP_001086373 (RefSeq)
cattle IFT88 514177 (Entrez Gene)
Chr12 NP_001104256 (RefSeq)
NM_001110786 (RefSeq)
dog IFT88 477345 (Entrez Gene)
Chr25 XP_534539 (RefSeq)
chicken IFT88 418952 (Entrez Gene)
Chr1 XP_003640630 (RefSeq)
western clawed frog ift88 100490149 (Entrez Gene)
ChrUN XP_002938005 (RefSeq)
zebrafish ift88 321855 (Entrez Gene)
Chr9 NP_001001725 (RefSeq)
NM_001001725 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/19/2014
MGI 5.19
The Jackson Laboratory