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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
469

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human HBA1 HGNC:4823 (HGNC)
3039 (Entrez Gene)
141800 (OMIM)
Chr16 p13.3 Chr16:176680-177521 (+)
GRCh38
Alpha-Thalassemia
Heinz Body Anemias
Hemoglobin H Disease; HBH
Hemoglobin--Alpha Locus 1; HBA1
P69905 (UniProt | EBI)
NM_000558 (RefSeq)
HBA2 HGNC:4824 (HGNC)
3040 (Entrez Gene)
141850 (OMIM)
Chr16 p13.3 Chr16:172847-173710 (+)
GRCh38
Alpha-Thalassemia
Heinz Body Anemias
Hemoglobin H Disease; HBH
P69905 (UniProt | EBI)
NM_000517 (RefSeq)
mouse Hba-a1 MGI:96015 (MGI)
15122 (Entrez Gene)
Gene Tree
VISTA-Point
Chr11 18.86 cM Chr11:32283511-32284465 (+)
GRCm38
Hemoglobin--Alpha Locus 1; HBA1
Hemoglobin--Beta Locus; HBB
OTTMUSG00000005377 (VEGA)
OTTMUSP00000005553 (VEGA)
OTTMUST00000011991 (VEGA)
Hba-a2 MGI:96016 (MGI)
110257 (Entrez Gene)
Gene Tree
VISTA-Point
Chr11 18.87 cM Chr11:32296489-32297298 (+)
GRCm38
OTTMUSG00000005376 (VEGA)
OTTMUSP00000005552 (VEGA)
OTTMUST00000011990 (VEGA)
rat LOC287167 287167 (Entrez Gene)
Chr10 q12 NP_001013875 (RefSeq)
NM_001013853 (RefSeq)
rhesus macaque HBA2 693930 (Entrez Gene)
Chr20 NP_001038189 (RefSeq)
NM_001044724 (RefSeq)
HBA2 701930 (Entrez Gene)
Chr20 NP_001253705 (RefSeq)
NM_001266776 (RefSeq)
cattle HBA 512439 (Entrez Gene)
Chr25 P01966 (UniProt | EBI)
NM_001077422 (RefSeq)
HBA1 100140149 (Entrez Gene)
Chr25 XP_001788728 (RefSeq)
dog LOC100855540 100855540 (Entrez Gene)
Chr6 NP_001257815 (RefSeq)
NM_001270886 (RefSeq)
LOC100855558 100855558 (Entrez Gene)
Chr6 NP_001257814 (RefSeq)
NM_001270885 (RefSeq)
chicken HBAA 416652 (Entrez Gene)
Chr14 P01994 (UniProt | EBI)
NM_001004376 (RefSeq)
LOC100858011 100858011 (Entrez Gene)
Chr14 XP_003643239 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
07/23/2014
MGI 5.19
The Jackson Laboratory