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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
4583

 
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human TNFAIP2 HGNC:11895 (HGNC)
7127 (Entrez Gene)
603300 (OMIM)
HGNC homology
Chr14 q32.32 Chr14:103121175-103137439 (+)
GRCh38.p7
Q03169 (UniProt | EBI)
NM_006291 (RefSeq)
mouse Tnfaip2 MGI:104960 (MGI)
21928 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr12 60.99 cM Chr12:111442469-111455018 (+)
GRCm38
ENSMUSG00000021281 (Ensembl Gene Model)
ENSMUSP00000105415 (Ensembl)
ENSMUST00000109792 (Ensembl)
rat Tnfaip2 299339 (Entrez Gene)
Chr6 q32 NP_001131105 (RefSeq)
NM_001137633 (RefSeq)
chimpanzee TNFAIP2 735512 (Entrez Gene)
Chr14 XP_016782249 (RefSeq)
cattle TNFAIP2 786672 (Entrez Gene)
Chr21 NP_001178118 (RefSeq)
NM_001191189 (RefSeq)
dog TNFAIP2 480440 (Entrez Gene)
Chr8 XP_022278107 (RefSeq)
chicken TNFAIP2 423477 (Entrez Gene)
Chr5 XP_015143422 (RefSeq)
zebrafish tnfaip2a 567159 (Entrez Gene)
Chr20 NP_001025387 (RefSeq)
NM_001030216 (RefSeq)
tnfaip2b 569366 (Entrez Gene)
Chr13 XP_697839 (RefSeq)
frog, western clawed tnfaip2 100485899 (Entrez Gene)
Chr8 XP_031747515 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
09/08/2020
MGI 6.15
The Jackson Laboratory