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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
45811

 
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human AMN1 HGNC:27281 (HGNC)
196394 (Entrez Gene)
HGNC homology
Chr12 p11.21 Chr12:31671137-31729178 (-)
GRCh38.p7
Q8IY45 (UniProt | EBI)
NM_001278412 (RefSeq)
mouse Amn1 MGI:2442933 (MGI)
232566 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr6 78.81 cM Chr6:149157261-149188742 (-)
GRCm38
232566 (NCBI Gene Model)
NP_001106895 (RefSeq)
NM_001356344 (RefSeq)
rat Amn1 302032 (Entrez Gene)
Chr4 q44 Q5U201 (UniProt | EBI)
NM_001008333 (RefSeq)
chimpanzee AMN1 465272 (Entrez Gene)
Chr12 XP_016779177 (RefSeq)
cattle AMN1 524465 (Entrez Gene)
Chr5 Q32L08 (UniProt | EBI)
NM_001075858 (RefSeq)
dog AMN1 489046 (Entrez Gene)
Chr27 XP_005637058 (RefSeq)
chicken AMN1 418137 (Entrez Gene)
Chr1 XP_004937957 (RefSeq)
zebrafish amn1 751744 (Entrez Gene)
Chr25 Q0P4D1 (UniProt | EBI)
NM_001045454 (RefSeq)
frog, western clawed amn1 100485350 (Entrez Gene)
Chr3 XP_031754376 (RefSeq)
macaque, rhesus AMN1 695467 (Entrez Gene)
Chr11 XP_015006884 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
06/23/2020
MGI 6.15
The Jackson Laboratory