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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
4564

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human RP1 HGNC:10263 (HGNC)
6101 (Entrez Gene)
603937 (OMIM)
Chr8 q12.1 Chr8:54616067-54630834 (+)
GRCh38
Retinitis Pigmentosa 1; RP1
P56715 (UniProt | EBI)
NM_006269 (RefSeq)
mouse Rp1 MGI:1341105 (MGI)
19888 (Entrez Gene)
Gene Tree
VISTA-Point
Chr1 1.65 cM Chr1:4343507-4360314 (-)
GRCm38
Retinitis Pigmentosa 1; RP1
ENSMUSG00000025900 (Ensembl Gene Model)
ENSMUSP00000027032 (Ensembl)
ENSMUST00000027032 (Ensembl)
rat Rp1 681377 (Entrez Gene)
Chr5 q12 NP_001182605 (RefSeq)
NM_001195676 (RefSeq)
chimpanzee RP1 472766 (Entrez Gene)
Chr8 XP_001153192 (RefSeq)
rhesus macaque RP1 677695 (Entrez Gene)
Chr8 XP_001083644 (RefSeq)
cattle RP1 280916 (Entrez Gene)
Chr14 Q8MJ05 (UniProt | EBI)
NM_173958 (RefSeq)
dog RP1 403565 (Entrez Gene)
Chr29 Q8MJ04 (UniProt | EBI)
NM_001003040 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory