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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
4559

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PRPH HGNC:9461 (HGNC)
5630 (Entrez Gene)
170710 (OMIM)
Chr12 q12-q13 Chr12:49295013-49298698 (+)
GRCh38
Amyotrophic Lateral Sclerosis 1; ALS1
P41219 (UniProt | EBI)
NM_006262 (RefSeq)
mouse Prph MGI:97774 (MGI)
19132 (Entrez Gene)
Gene Tree
VISTA-Point
Chr15 55.72 cM Chr15:99055174-99058978 (+)
GRCm38
19132 (NCBI Gene Model)
P15331 (UniProt | EBI)
NM_013639 (RefSeq)
rat Prph 24688 (Entrez Gene)
Chr7 q34 P21807 (UniProt | EBI)
NM_012633 (RefSeq)
chimpanzee PRPH 451877 (Entrez Gene)
Chr12 XP_509044 (RefSeq)
rhesus macaque PRPH 709827 (Entrez Gene)
Chr11 XP_001108977 (RefSeq)
cattle PRPH 510082 (Entrez Gene)
Chr5 A6QQJ3 (UniProt | EBI)
NM_001102378 (RefSeq)
dog PRPH 477618 (Entrez Gene)
Chr27 XP_534812 (RefSeq)
zebrafish prph 30259 (Entrez Gene)
Chr11 NP_571129 (RefSeq)
NM_131054 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/12/2014
MGI 5.19
The Jackson Laboratory