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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
4531

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PIN1 HGNC:8988 (HGNC)
5300 (Entrez Gene)
601052 (OMIM)
Chr19 p13 Chr19:9835207-9849689 (+)
GRCh38
Q13526 (UniProt | EBI)
NM_006221 (RefSeq)
mouse Pin1 MGI:1346036 (MGI)
23988 (Entrez Gene)
Gene Tree
VISTA-Point
Chr9 7.6 cM Chr9:20652130-20666584 (+)
GRCm38
Alzheimer Disease; AD
23988 (NCBI Gene Model)
Q9QUR7 (UniProt | EBI)
NM_023371 (RefSeq)
rat Pin1 298696 (Entrez Gene)
Chr8 q13 NP_001100171 (RefSeq)
NM_001106701 (RefSeq)
chimpanzee PIN1 745021 (Entrez Gene)
Chr19 XP_001161990 (RefSeq)
cattle PIN1 535470 (Entrez Gene)
Chr7 Q5BIN5 (UniProt | EBI)
NM_001034632 (RefSeq)
dog PIN1 484963 (Entrez Gene)
Chr20 XP_542080 (RefSeq)
chicken PIN1 100859153 (Entrez Gene)
ChrUN XP_003643613 (RefSeq)
western clawed frog pin1 493472 (Entrez Gene)
ChrUN NP_001008110 (RefSeq)
NM_001008109 (RefSeq)
zebrafish pin1 393721 (Entrez Gene)
Chr1 NP_957042 (RefSeq)
NM_200748 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory