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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PDE6C HGNC:8787 (HGNC)
5146 (Entrez Gene)
600827 (OMIM)
PDE6C (MyGene.info)
HGNC homology
Chr10 q23.33 Chr10:93612588-93665673 (+)
cone dystrophy
P51160 (UniProt | EBI)
NM_006204 (RefSeq)
mouse Pde6c MGI:105956 (MGI)
110855 (Entrez Gene)
Gene Tree
HGNC homology
Chr19 32.77 cM Chr19:38132781-38183955 (+)
110855 (NCBI Gene Model)
Q91ZQ1 (UniProt | EBI)
NM_033614 (RefSeq)
rat Pde6c 361752 (Entrez Gene)
Chr1 q53 NP_001101992 (RefSeq)
NM_001108522 (RefSeq)
chimpanzee PDE6C 740456 (Entrez Gene)
Chr10 XP_001148438 (RefSeq)
cattle PDE6C 281975 (Entrez Gene)
Chr26 P16586 (UniProt | EBI)
NM_174419 (RefSeq)
dog PDE6C 486805 (Entrez Gene)
Chr28 XP_013964576 (RefSeq)
chicken PDE6C 395834 (Entrez Gene)
Chr6 P52731 (UniProt | EBI)
NM_204986 (RefSeq)
zebrafish pde6c 393845 (Entrez Gene)
Chr12 NP_957165 (RefSeq)
NM_200871 (RefSeq)
frog, western clawed pde6c 100485634 (Entrez Gene)
Chr7 XP_002937230 (RefSeq)
macaque, rhesus PDE6C 700261 (Entrez Gene)
Chr9 XP_001092604 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.12
The Jackson Laboratory