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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
4521

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PDE6C HGNC:8787 (HGNC)
5146 (Entrez Gene)
600827 (OMIM)
Chr10 q24 Chr10:93612588-93665673 (+)
GRCh38
Cone Dystrophy 4; COD4
P51160 (UniProt | EBI)
NM_006204 (RefSeq)
mouse Pde6c MGI:105956 (MGI)
110855 (Entrez Gene)
Gene Tree
VISTA-Point
Chr19 32.77 cM Chr19:38132781-38183947 (+)
GRCm38
Achromatopsia 2; ACHM2
ENSMUSG00000024992 (Ensembl Gene Model)
ENSMUSP00000025956 (Ensembl)
ENSMUST00000025956 (Ensembl)
rat Pde6c 361752 (Entrez Gene)
Chr1 q53 NP_001101992 (RefSeq)
NM_001108522 (RefSeq)
chimpanzee PDE6C 740456 (Entrez Gene)
Chr10 XP_001148438 (RefSeq)
rhesus macaque PDE6C 700261 (Entrez Gene)
Chr9 XP_001092604 (RefSeq)
cattle PDE6C 281975 (Entrez Gene)
Chr26 P16586 (UniProt | EBI)
NM_174419 (RefSeq)
dog PDE6C 486805 (Entrez Gene)
Chr28 XP_543934 (RefSeq)
chicken PDE6C 395834 (Entrez Gene)
Chr6 P52731 (UniProt | EBI)
NM_204986 (RefSeq)
zebrafish pde6c 393845 (Entrez Gene)
Chr12 NP_957165 (RefSeq)
NM_200871 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory