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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SPECC1 HGNC:30615 (HGNC)
92521 (Entrez Gene)
608793 (OMIM)
SPECC1 (MyGene.info)
HGNC homology
Chr17 p11.2 Chr17:20009301-20319026 (+)
Q5M775 (UniProt | EBI)
NM_001033555 (RefSeq)
mouse Specc1 MGI:2442356 (MGI)
432572 (Entrez Gene)
Gene Tree
HGNC homology
Chr11 37.96 cM Chr11:61956763-62223013 (+)
432572 (NCBI Gene Model)
Q5SXY1 (UniProt | EBI)
NM_001281818 (RefSeq)
rat Specc1 303208 (Entrez Gene)
Chr10 q22-q23 NP_001034106 (RefSeq)
NM_001039017 (RefSeq)
cattle SPECC1 506538 (Entrez Gene)
Chr19 XP_010814402 (RefSeq)
dog SPECC1 489524 (Entrez Gene)
Chr5 XP_005620166 (RefSeq)
chicken SPECC1 417595 (Entrez Gene)
Chr19 XP_415840 (RefSeq)
zebrafish specc1 562343 (Entrez Gene)
Chr5 XP_009300192 (RefSeq)
frog, western clawed specc1 100380013 (Entrez Gene)
Chr2 XP_004911747 (RefSeq)
macaque, rhesus SPECC1 704221 (Entrez Gene)
Chr16 XP_028691950 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
MGI 6.14
The Jackson Laboratory