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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
4494

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human NKX3-1 HGNC:7838 (HGNC)
4824 (Entrez Gene)
602041 (OMIM)
NKX3-1 (MyGene.info)
HGNC homology
Chr8 p21.2 Chr8:23678693-23682937 (-)
GRCh38.p7
Q99801 (UniProt | EBI)
NM_001256339 (RefSeq)
mouse Nkx3-1 MGI:97352 (MGI)
18095 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr14 36.02 cM Chr14:69190692-69194658 (+)
GRCm38
prostate cancer
18095 (NCBI Gene Model)
P97436 (UniProt | EBI)
NM_010921 (RefSeq)
rat Nkx3-1 305999 (Entrez Gene)
Chr15 p11 NP_001029316 (RefSeq)
NM_001034144 (RefSeq)
chimpanzee NKX3-1 743612 (Entrez Gene)
Chr8 XP_016814728 (RefSeq)
cattle NKX3-1 782252 (Entrez Gene)
Chr8 NP_001178084 (RefSeq)
NM_001191155 (RefSeq)
dog NKX3-1 486114 (Entrez Gene)
Chr25 XP_022265671 (RefSeq)
chicken NKX3-1 101747314 (Entrez Gene)
Chr22 XP_004947618 (RefSeq)
zebrafish nkx3-1 555375 (Entrez Gene)
Chr8 XP_682960 (RefSeq)
frog, western clawed nkx3-1 100038192 (Entrez Gene)
Chr3 XP_012814889 (RefSeq)
macaque, rhesus NKX3-1 710591 (Entrez Gene)
Chr8 NP_001253152 (RefSeq)
NM_001266223 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
09/10/2019
MGI 6.14
The Jackson Laboratory