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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 67, Dec 12, 2012)
449

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PMS1 HGNC:9121 (HGNC)
5378 (Entrez Gene)
600258 (OMIM)
Chr2 q31.1 Chr2:189784085-189877629 (+)
GRCh38
Lynch Syndrome I
P54277 (UniProt | EBI)
NM_000534 (RefSeq)
mouse Pms1 MGI:1202302 (MGI)
227099 (Entrez Gene)
Gene Tree
VISTA-Point
Chr1 26.99 cM Chr1:53189187-53297018 (-)
GRCm38
OTTMUSG00000021891 (VEGA)
OTTMUSP00000024549 (VEGA)
OTTMUST00000051984 (VEGA)
rat Pms1 494322 (Entrez Gene)
Chr9 q22 NP_001009535 (RefSeq)
NM_001009535 (RefSeq)
chimpanzee PMS1 459827 (Entrez Gene)
Chr2B XP_515987 (RefSeq)
cattle PMS1 529491 (Entrez Gene)
Chr2 NP_001071449 (RefSeq)
NM_001077981 (RefSeq)
dog PMS1 478840 (Entrez Gene)
Chr37 XP_536002 (RefSeq)
chicken PMS1 423980 (Entrez Gene)
Chr7 NP_001006508 (RefSeq)
NM_001006508 (RefSeq)
zebrafish pms1 368631 (Entrez Gene)
Chr9 NP_958476 (RefSeq)
NM_201319 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
04/08/2014
MGI 5.17
The Jackson Laboratory