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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PMS1 HGNC:9121 (HGNC)
5378 (Entrez Gene)
600258 (OMIM)
PMS1 (MyGene.info)
HGNC homology
Chr2 q32.2 Chr2:189784085-189877629 (+)
Lynch syndrome
P54277 (UniProt | EBI)
NM_001128144 (RefSeq)
mouse Pms1 MGI:1202302 (MGI)
227099 (Entrez Gene)
Gene Tree
HGNC homology
Chr1 26.99 cM Chr1:53189187-53297018 (-)
OTTMUSG00000021891 (VEGA)
OTTMUSP00000024549 (VEGA)
OTTMUST00000051984 (VEGA)
rat Pms1 494322 (Entrez Gene)
Chr9 q22 NP_001009535 (RefSeq)
NM_001009535 (RefSeq)
chimpanzee PMS1 459827 (Entrez Gene)
Chr2B XP_024210745 (RefSeq)
cattle PMS1 529491 (Entrez Gene)
Chr2 NP_001071449 (RefSeq)
NM_001077981 (RefSeq)
dog PMS1 478840 (Entrez Gene)
Chr37 XP_536002 (RefSeq)
chicken PMS1 423980 (Entrez Gene)
Chr7 NP_001006508 (RefSeq)
NM_001006508 (RefSeq)
zebrafish pms1 368631 (Entrez Gene)
Chr9 NP_958476 (RefSeq)
NM_201319 (RefSeq)
frog, western clawed pms1 548373 (Entrez Gene)
Chr9 NP_001136373 (RefSeq)
NM_001142901 (RefSeq)
macaque, rhesus PMS1 713641 (Entrez Gene)
Chr12 XP_014966030 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.12
The Jackson Laboratory