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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
4475

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SFN HGNC:10773 (HGNC)
2810 (Entrez Gene)
601290 (OMIM)
Stratifin (MyGene.info)
HGNC homology
Chr1 p36.11 Chr1:26863142-26864456 (+)
GRCh38.p7
P31947 (UniProt | EBI)
NM_006142 (RefSeq)
mouse Sfn MGI:1891831 (MGI)
55948 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr4 66.25 cM Chr4:133600556-133602168 (-)
GRCm38
55948 (NCBI Gene Model)
O70456 (UniProt | EBI)
NM_018754 (RefSeq)
rat Sfn 313017 (Entrez Gene)
Chr5 q36 XP_001065560 (RefSeq)
chimpanzee SFN 737412 (Entrez Gene)
Chr1 XP_001145451 (RefSeq)
cattle SFN 528453 (Entrez Gene)
Chr2 Q0VC36 (UniProt | EBI)
NM_001075912 (RefSeq)
dog SFN 487351 (Entrez Gene)
Chr2 XP_005617798 (RefSeq)
chicken SFN 408037 (Entrez Gene)
Chr23 NP_001280105 (RefSeq)
NM_001293176 (RefSeq)
macaque, rhesus SFN 715055 (Entrez Gene)
Chr1 NP_001245060 (RefSeq)
NM_001258131 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
05/26/2020
MGI 6.15
The Jackson Laboratory