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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
4452

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human YAP1 HGNC:16262 (HGNC)
10413 (Entrez Gene)
606608 (OMIM)
Chr11 q13 Chr11:102110420-102233423 (+)
GRCh38
Coloboma, Ocular, with or without Hearing Impairment, Cleft Lip/Palate, and/or Mental Retardation; COB1
P46937 (UniProt | EBI)
NM_006106 (RefSeq)
mouse Yap1 MGI:103262 (MGI)
22601 (Entrez Gene)
Gene Tree
VISTA-Point
Chr9 2.46 cM Chr9:7931999-8004596 (-)
GRCm38
OTTMUSG00000038037 (VEGA)
OTTMUSP00000054974 (VEGA)
OTTMUST00000097973 (VEGA)
chimpanzee YAP1 451506 (Entrez Gene)
Chr11 XP_001151402 (RefSeq)
rhesus macaque LOC704382 704382 (Entrez Gene)
Chr14 XP_002799819 (RefSeq)
cattle YAP1 100336629 (Entrez Gene)
Chr15 XP_003583127 (RefSeq)
dog YAP1 479465 (Entrez Gene)
Chr5 XP_536601 (RefSeq)
chicken YAP1 396171 (Entrez Gene)
Chr1 P46936 (UniProt | EBI)
NM_205243 (RefSeq)
western clawed frog yap1 100488779 (Entrez Gene)
ChrUN NP_001182697 (RefSeq)
NM_001195768 (RefSeq)
zebrafish yap1 561411 (Entrez Gene)
Chr18 NP_001132952 (RefSeq)
NM_001139480 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/19/2014
MGI 5.19
The Jackson Laboratory