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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
443

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human VLDLR HGNC:12698 (HGNC)
7436 (Entrez Gene)
192977 (OMIM)
Chr9 p24 Chr9:2621774-2654485 (+)
GRCh38
Cerebellar Ataxia, Mental Retardation, and Dysequilibrium Syndrome 1; CAMRQ1
P98155 (UniProt | EBI)
NM_001018056 (RefSeq)
mouse Vldlr MGI:98935 (MGI)
22359 (Entrez Gene)
Gene Tree
VISTA-Point
Chr19 21.77 cM Chr19:27216484-27254231 (+)
GRCm38
Macular Degeneration, Age-Related, 1; ARMD1
OTTMUSG00000035962 (VEGA)
OTTMUSP00000050945 (VEGA)
OTTMUST00000092260 (VEGA)
rat Vldlr 25696 (Entrez Gene)
Chr1 q51 P98166 (UniProt | EBI)
NM_013155 (RefSeq)
chimpanzee VLDLR 464967 (Entrez Gene)
Chr9 XP_520460 (RefSeq)
rhesus macaque VLDLR 574284 (Entrez Gene)
Chr15 NP_001028079 (RefSeq)
NM_001032907 (RefSeq)
cattle vldlr 282123 (Entrez Gene)
Chr8 NP_776914 (RefSeq)
NM_174489 (RefSeq)
dog VLDLR 476336 (Entrez Gene)
Chr1 NP_001273907 (RefSeq)
NM_001286978 (RefSeq)
chicken VLDLR 396154 (Entrez Gene)
ChrZ P98165 (UniProt | EBI)
NM_205229 (RefSeq)
western clawed frog vldlr 733485 (Entrez Gene)
ChrUN XP_002934223 (RefSeq)
zebrafish vldlr 393897 (Entrez Gene)
Chr10 NP_957217 (RefSeq)
NM_200923 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/23/2014
MGI 5.19
The Jackson Laboratory