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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 67, Dec 12, 2012)
44067

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human IGBP1 HGNC:5461 (HGNC)
3476 (Entrez Gene)
300139 (OMIM)
ChrX q13.1-q13.3 ChrX:70133460-70166324 (+)
GRCh38
Corpus Callosum, Agenesis of, with Mental Retardation, Ocular Coloboma, and Micrognathia
P78318 (UniProt | EBI)
NM_001551 (RefSeq)
mouse Igbp1 MGI:1346500 (MGI)
18518 (Entrez Gene)
Gene Tree
VISTA-Point
ChrX 43.72 cM ChrX:100494291-100516125 (+)
GRCm38
OTTMUSG00000018243 (VEGA)
OTTMUSP00000019822 (VEGA)
OTTMUST00000044098 (VEGA)
rat Igbp1 58845 (Entrez Gene)
ChrX q31 O08836 (UniProt | EBI)
NM_031624 (RefSeq)
rhesus macaque IGBP1 694632 (Entrez Gene)
ChrX NP_001182718 (RefSeq)
NM_001195789 (RefSeq)
cattle IGBP1 100296883 (Entrez Gene)
ChrX NP_001229513 (RefSeq)
NM_001242584 (RefSeq)
LOC534155 534155 (Entrez Gene)
Chr8 NP_001098458 (RefSeq)
NM_001104988 (RefSeq)
dog IGBP1 480950 (Entrez Gene)
ChrX XP_005641500 (RefSeq)
chicken IGBP1 768951 (Entrez Gene)
Chr4 XP_001231445 (RefSeq)
zebrafish igbp1 406843 (Entrez Gene)
Chr5 NP_998687 (RefSeq)
NM_213522 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
04/08/2014
MGI 5.17
The Jackson Laboratory