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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
4392

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human TCIRG1 HGNC:11647 (HGNC)
10312 (Entrez Gene)
604592 (OMIM)
Chr11 q13.2 Chr11:68038995-68053839 (+)
GRCh38
Osteopetrosis, Autosomal Recessive 1; OPTB1
Q13488 (UniProt | EBI)
NM_006019 (RefSeq)
mouse Tcirg1 MGI:1350931 (MGI)
27060 (Entrez Gene)
Gene Tree
VISTA-Point
Chr19 3.62 cM Chr19:3896050-3907133 (-)
GRCm38
Clubfoot, Congenital, with or without Deficiency of Long Bones and/or Mirror-Image Polydactyly; CCF
Osteopetrosis, Autosomal Recessive 1; OPTB1
OTTMUSG00000033070 (VEGA)
OTTMUSP00000044285 (VEGA)
OTTMUST00000082591 (VEGA)
rat Tcirg1 293650 (Entrez Gene)
Chr1 q42 NP_954520 (RefSeq)
NM_199089 (RefSeq)
chimpanzee TCIRG1 466895 (Entrez Gene)
Chr11 XP_522295 (RefSeq)
rhesus macaque TCIRG1 710650 (Entrez Gene)
Chr14 XP_001103418 (RefSeq)
cattle TCIRG1 513684 (Entrez Gene)
Chr29 NP_001069102 (RefSeq)
NM_001075634 (RefSeq)
dog TCIRG1 483691 (Entrez Gene)
Chr18 XP_540812 (RefSeq)
chicken TCIRG1 395472 (Entrez Gene)
Chr5 NP_990053 (RefSeq)
NM_204722 (RefSeq)
western clawed frog tcirg1 549603 (Entrez Gene)
ChrUN NP_001016849 (RefSeq)
NM_001016849 (RefSeq)
zebrafish LOC100147923 100147923 (Entrez Gene)
Chr14
tcirg1 100003139 (Entrez Gene)
Chr1 XP_005160329 (RefSeq)
zgc:55891 406342 (Entrez Gene)
Chr14 NP_998234 (RefSeq)
NM_213069 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/16/2014
MGI 5.20
The Jackson Laboratory