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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
4390

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PROM1 HGNC:9454 (HGNC)
8842 (Entrez Gene)
604365 (OMIM)
Chr4 p15.32 Chr4:15968226-16084059 (-)
GRCh38
Cone-Rod Dystrophy 12; CORD12
Macular Dystrophy, Retinal, 2; MCDR2
Retinitis Pigmentosa 41; RP41
Stargardt Disease 4; STGD4
O43490 (UniProt | EBI)
NM_006017 (RefSeq)
mouse Prom1 MGI:1100886 (MGI)
19126 (Entrez Gene)
Gene Tree
VISTA-Point
Chr5 23.97 cM Chr5:43993622-44101736 (-)
GRCm38
Retinitis Pigmentosa 41; RP41
19126 (NCBI Gene Model)
O54990 (UniProt | EBI)
NM_001163577 (RefSeq)
rat Prom1 60357 (Entrez Gene)
Chr14 q21 NP_068519 (RefSeq)
NM_021751 (RefSeq)
chimpanzee PROM1 461127 (Entrez Gene)
Chr4 XP_517115 (RefSeq)
rhesus macaque PROM1 714610 (Entrez Gene)
Chr5 NP_001070888 (RefSeq)
NM_001077420 (RefSeq)
cattle PROM1 618054 (Entrez Gene)
Chr6 NP_001232881 (RefSeq)
NM_001245952 (RefSeq)
dog PROM1 488816 (Entrez Gene)
Chr3 XP_850831 (RefSeq)
chicken PROM1 422825 (Entrez Gene)
Chr4 NP_001278578 (RefSeq)
NM_001031162 (RefSeq)
western clawed frog prom1 100036621 (Entrez Gene)
ChrUN NP_001090649 (RefSeq)
NM_001097180 (RefSeq)
zebrafish prom1a 322857 (Entrez Gene)
Chr14 Q9W735 (UniProt | EBI)
NM_001115143 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory