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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PROM1 HGNC:9454 (HGNC)
8842 (Entrez Gene)
604365 (OMIM)
CD133 (MyGene.info)
HGNC homology
Chr4 p15.32 Chr4:15968226-16084100 (-)
cone-rod dystrophy 12
retinitis pigmentosa 41
Stargardt disease
O43490 (UniProt | EBI)
NM_001145852 (RefSeq)
mouse Prom1 MGI:1100886 (MGI)
19126 (Entrez Gene)
Gene Tree
HGNC homology
Chr5 23.97 cM Chr5:43993620-44102032 (-)
retinitis pigmentosa 41
OTTMUSG00000053805 (VEGA)
OTTMUSP00000071087 (VEGA)
OTTMUST00000133865 (VEGA)
rat Prom1 60357 (Entrez Gene)
Chr14 q21 NP_068519 (RefSeq)
NM_001110137 (RefSeq)
chimpanzee PROM1 461127 (Entrez Gene)
Chr4 XP_024211811 (RefSeq)
cattle PROM1 618054 (Entrez Gene)
Chr6 NP_001232881 (RefSeq)
NM_001245952 (RefSeq)
dog PROM1 488816 (Entrez Gene)
Chr3 NP_001301038 (RefSeq)
NM_001314109 (RefSeq)
chicken PROM1 422825 (Entrez Gene)
Chr4 NP_001278578 (RefSeq)
NM_001291649 (RefSeq)
zebrafish prom1a 322857 (Entrez Gene)
Chr14 Q9W735 (UniProt | EBI)
NM_001115143 (RefSeq)
frog, western clawed prom1 100036621 (Entrez Gene)
Chr1 NP_001090649 (RefSeq)
NM_001097180 (RefSeq)
macaque, rhesus PROM1 714610 (Entrez Gene)
Chr5 NP_001070888 (RefSeq)
NM_001077420 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.12
The Jackson Laboratory