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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
4360

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SIX1 HGNC:10887 (HGNC)
6495 (Entrez Gene)
601205 (OMIM)
Chr14 q23.1 Chr14:60644699-60649437 (-)
GRCh38
Branchiootic Syndrome 3; BOS3
Branchiootorenal Syndrome 1; BOR1
Deafness, Autosomal Dominant 23; DFNA23
Q15475 (UniProt | EBI)
NM_005982 (RefSeq)
mouse Six1 MGI:102780 (MGI)
20471 (Entrez Gene)
Gene Tree
VISTA-Point
Chr12 30.34 cM Chr12:73040015-73053887 (-)
GRCm38
Branchiootorenal Syndrome 1; BOR1
OTTMUSG00000040058 (VEGA)
OTTMUSP00000058166 (VEGA)
OTTMUST00000104017 (VEGA)
rat Six1 114634 (Entrez Gene)
Chr6 q24 NP_446211 (RefSeq)
NM_053759 (RefSeq)
chimpanzee SIX1 452952 (Entrez Gene)
Chr14 XP_509988 (RefSeq)
rhesus macaque SIX1 703696 (Entrez Gene)
Chr7 XP_001096585 (RefSeq)
cattle SIX1 511371 (Entrez Gene)
Chr10 XP_588692 (RefSeq)
dog SIX1 490719 (Entrez Gene)
Chr8 XP_547841 (RefSeq)
chicken SIX1 693262 (Entrez Gene)
Chr5 NP_001038150 (RefSeq)
NM_001044685 (RefSeq)
western clawed frog six1 100101702 (Entrez Gene)
ChrUN NP_001093693 (RefSeq)
NM_001100223 (RefSeq)
zebrafish six1b 404627 (Entrez Gene)
Chr20 Q6NZ04 (UniProt | EBI)
NM_207095 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
11/11/2014
MGI 5.20
The Jackson Laboratory