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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
4340

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human AFF1 HGNC:7135 (HGNC)
4299 (Entrez Gene)
159557 (OMIM)
AFF1 (MyGene.info)
HGNC homology
Chr4 q21.3-q22.1 Chr4:86935002-87141054 (+)
GRCh38.p7
P51825 (UniProt | EBI)
NM_005935 (RefSeq)
mouse Aff1 MGI:1100819 (MGI)
17355 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr5 50.45 cM Chr5:103692374-103855322 (+)
GRCm38
OTTMUSG00000022037 (VEGA)
OTTMUSP00000024781 (VEGA)
OTTMUST00000052309 (VEGA)
rat Aff1 305152 (Entrez Gene)
Chr14 p22 NP_001100676 (RefSeq)
NM_001107206 (RefSeq)
chimpanzee AFF1 461362 (Entrez Gene)
Chr4 XP_009446270 (RefSeq)
cattle AFF1 781149 (Entrez Gene)
Chr6 NP_001178454 (RefSeq)
NM_001191525 (RefSeq)
dog AFF1 100683405 (Entrez Gene)
Chr32 XP_022269292 (RefSeq)
chicken AFF1 422590 (Entrez Gene)
Chr4 XP_420549 (RefSeq)
macaque, rhesus AFF1 700733 (Entrez Gene)
Chr5 XP_014994246 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
07/31/2018
MGI 6.12
The Jackson Laboratory