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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
43122

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human RAB43 HGNC:19983 (HGNC)
339122 (Entrez Gene)
Chr3 q21.3 Chr3:129087569-129122150 (-)
GRCh38
Q86YS6 (UniProt | EBI)
NM_198490 (RefSeq)
mouse Rab43 MGI:1917084 (MGI)
69834 (Entrez Gene)
Gene Tree
VISTA-Point
Chr6 39.13 cM Chr6:87788853-87812164 (-)
GRCm38
OTTMUSG00000022164 (VEGA)
OTTMUSP00000024979 (VEGA)
OTTMUST00000052630 (VEGA)
rat Rab43 500249 (Entrez Gene)
Chr4 q34 Q53B90 (UniProt | EBI)
NM_001024331 (RefSeq)
chimpanzee RAB43 100615763 (Entrez Gene)
Chr3 XP_003310046 (RefSeq)
rhesus macaque RAB43 705873 (Entrez Gene)
Chr11 XP_001094209 (RefSeq)
dog RAB43 100856686 (Entrez Gene)
Chr20 XP_003639768 (RefSeq)
chicken RAB43 415970 (Entrez Gene)
Chr12 NP_001264831 (RefSeq)
NM_001277902 (RefSeq)
zebrafish zgc:153788 751627 (Entrez Gene)
Chr11 NP_001038812 (RefSeq)
NM_001045347 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory