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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
41948

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SEC22C HGNC:16828 (HGNC)
9117 (Entrez Gene)
604028 (OMIM)
HGNC homology
Chr3 p22.1 Chr3:42547967-42601080 (-)
GRCh38.p7
Q9BRL7 (UniProt | EBI)
NM_001201572 (RefSeq)
mouse Sec22c MGI:2447871 (MGI)
215474 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr9 72.54 cM Chr9:121680045-121705490 (-)
GRCm38
ENSMUSG00000061536 (Ensembl Gene Model)
ENSMUSP00000077628 (Ensembl)
ENSMUST00000078547 (Ensembl)
rat Sec22c 687022 (Entrez Gene)
Chr8 XP_008764925 (RefSeq)
chimpanzee SEC22C 460292 (Entrez Gene)
Chr3 XP_016796325 (RefSeq)
cattle SEC22C 614905 (Entrez Gene)
Chr22 Q2YDJ2 (UniProt | EBI)
NM_001046546 (RefSeq)
dog SEC22C 485615 (Entrez Gene)
Chr23 XP_013962230 (RefSeq)
chicken SEC22C 420387 (Entrez Gene)
Chr2 XP_004939127 (RefSeq)
zebrafish sec22c 558856 (Entrez Gene)
Chr24 XP_707343 (RefSeq)
frog, western clawed sec22c 100488477 (Entrez Gene)
Chr6 XP_004915645 (RefSeq)
macaque, rhesus SEC22C 716351 (Entrez Gene)
Chr2 NP_001181606 (RefSeq)
NM_001194677 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
06/04/2019
MGI 6.14
The Jackson Laboratory