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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
4182

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human TSPAN5 HGNC:17753 (HGNC)
10098 (Entrez Gene)
613136 (OMIM)
HGNC homology
Chr4 q23 Chr4:98470367-98658661 (-)
GRCh38.p7
P62079 (UniProt | EBI)
NM_005723 (RefSeq)
mouse Tspan5 MGI:1928096 (MGI)
56224 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr3 64.42 cM Chr3:138741848-138904433 (+)
GRCm38
56224 (NCBI Gene Model)
P62080 (UniProt | EBI)
NM_019571 (RefSeq)
rat Tspan5 362048 (Entrez Gene)
Chr2 q44 Q68VK5 (UniProt | EBI)
NM_001004090 (RefSeq)
chimpanzee TSPAN5 461390 (Entrez Gene)
Chr4 XP_009446330 (RefSeq)
cattle TSPAN5 538668 (Entrez Gene)
Chr6 Q17QJ5 (UniProt | EBI)
NM_001076119 (RefSeq)
dog TSPAN5 478486 (Entrez Gene)
Chr32 XP_850718 (RefSeq)
chicken TSPAN17 422702 (Entrez Gene)
Chr4 XP_025005826 (RefSeq)
zebrafish tspan5a 450026 (Entrez Gene)
Chr7 NP_001006047 (RefSeq)
NM_001006047 (RefSeq)
frog, western clawed tspan5 779644 (Entrez Gene)
Chr1 NP_001072198 (RefSeq)
NM_001078730 (RefSeq)
macaque, rhesus TSPAN5 706537 (Entrez Gene)
Chr5 NP_001181219 (RefSeq)
NM_001194290 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
11/05/2019
MGI 6.14
The Jackson Laboratory