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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
41786

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human ATG16L1 HGNC:21498 (HGNC)
55054 (Entrez Gene)
610767 (OMIM)
Chr2 q37.1 Chr2:233251571-233295674 (+)
GRCh38
Inflammatory Bowel Disease 10; IBD10
Q676U5 (UniProt | EBI)
NM_017974 (RefSeq)
mouse Atg16l1 MGI:1924290 (MGI)
77040 (Entrez Gene)
Gene Tree
VISTA-Point
Chr1 44.44 cM Chr1:87755870-87792428 (+)
GRCm38
Inflammatory Bowel Disease 10; IBD10
OTTMUSG00000016467 (VEGA)
OTTMUSP00000017709 (VEGA)
OTTMUST00000039678 (VEGA)
rat Atg16l1 363278 (Entrez Gene)
Chr9 q35 NP_001102279 (RefSeq)
NM_001108809 (RefSeq)
chimpanzee ATG16L1 460022 (Entrez Gene)
Chr2B XP_001149723 (RefSeq)
rhesus macaque ATG16L1 714092 (Entrez Gene)
Chr12 NP_001248040 (RefSeq)
NM_001261111 (RefSeq)
cattle ATG16L1 509587 (Entrez Gene)
Chr3 NP_001178318 (RefSeq)
NM_001191389 (RefSeq)
dog ATG16L1 477412 (Entrez Gene)
Chr25 XP_534608 (RefSeq)
chicken ATG16L1 424746 (Entrez Gene)
Chr9 XP_003641799 (RefSeq)
western clawed frog atg16l1 550097 (Entrez Gene)
ChrUN Q5I0B9 (UniProt | EBI)
NM_001017343 (RefSeq)
zebrafish atg16l1 550552 (Entrez Gene)
Chr15 NP_001017854 (RefSeq)
NM_001017854 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory