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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
41762

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human TSPAN17 HGNC:13594 (HGNC)
26262 (Entrez Gene)
HGNC homology
Chr5 q35.2 Chr5:176647387-176659058 (+)
GRCh38.p7
Q96FV3 (UniProt | EBI)
NM_001366492 (RefSeq)
mouse Tspan17 MGI:1921507 (MGI)
74257 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr13 29.41 cM Chr13:54789377-54796776 (+)
GRCm38
ENSMUSG00000025875 (Ensembl Gene Model)
ENSMUSP00000115287 (Ensembl)
ENSMUST00000131692 (Ensembl)
rat Tspan17 306771 (Entrez Gene)
Chr17 p14 Q4V8E0 (UniProt | EBI)
NM_001013138 (RefSeq)
chimpanzee TSPAN17 462295 (Entrez Gene)
Chr5 XP_518122 (RefSeq)
cattle TSPAN17 509386 (Entrez Gene)
Chr7 Q58DN3 (UniProt | EBI)
NM_001014880 (RefSeq)
dog TSPAN17 489098 (Entrez Gene)
Chr4 XP_005619236 (RefSeq)
zebrafish tspan17 324950 (Entrez Gene)
Chr14 NP_001116517 (RefSeq)
NM_001123045 (RefSeq)
frog, western clawed tspan17 448429 (Entrez Gene)
Chr3 NP_001006754 (RefSeq)
NM_001006753 (RefSeq)
macaque, rhesus TSPAN17 697739 (Entrez Gene)
Chr6 NP_001248457 (RefSeq)
NM_001261528 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
11/05/2019
MGI 6.14
The Jackson Laboratory