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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 67, Dec 12, 2012)
41744

 
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human C19orf12 HGNC:25443 (HGNC)
83636 (Entrez Gene)
614297 (OMIM)
Chr19 q12 Chr19:29698886-29715789 (-)
GRCh38
Neurodegeneration with Brain Iron Accumulation 4; NBIA4
Spastic Paraplegia 43, Autosomal Recessive; SPG43
Q9NSK7 (UniProt | EBI)
NM_001031726 (RefSeq)
mouse 1600014C10Rik MGI:1919494 (MGI)
72244 (Entrez Gene)
Gene Tree
VISTA-Point
Chr7 25.36 cM Chr7:38183217-38197568 (+)
GRCm38
OTTMUSG00000042336 (VEGA)
OTTMUSP00000062470 (VEGA)
OTTMUST00000111538 (VEGA)
rat LOC690000 690000 (Entrez Gene)
Chr1 q22 XP_001073988 (RefSeq)
chimpanzee C19H19orf12 455913 (Entrez Gene)
Chr19 XP_530024 (RefSeq)
rhesus macaque LOC710444 710444 (Entrez Gene)
Chr19 XP_001099068 (RefSeq)
cattle C18H19orf12 533209 (Entrez Gene)
Chr18 Q08DM5 (UniProt | EBI)
NM_001076892 (RefSeq)
dog C1H19orf12 484611 (Entrez Gene)
Chr1 XP_541725 (RefSeq)
chicken C11H19orf12 415757 (Entrez Gene)
Chr11 NP_001264598 (RefSeq)
NM_001277669 (RefSeq)
zebrafish LOC100004554 100004554 (Entrez Gene)
Chr7 XP_001343826 (RefSeq)
LOC100537173 100537173 (Entrez Gene)
Chr7 XP_003199042 (RefSeq)
zgc:101715 447894 (Entrez Gene)
Chr7 NP_001004633 (RefSeq)
NM_001004633 (RefSeq)
zgc:112052 550358 (Entrez Gene)
Chr18 Q1L990 (UniProt | EBI)
NM_001017665 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
04/08/2014
MGI 5.17
The Jackson Laboratory