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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
4173

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human COL4A3BP HGNC:2205 (HGNC)
10087 (Entrez Gene)
604677 (OMIM)
COL4A3BP (MyGene.info)
HGNC homology
Chr5 q13.3 Chr5:75368486-75511981 (-)
GRCh38.p7
Q9Y5P4 (UniProt | EBI)
NM_001130105 (RefSeq)
mouse Col4a3bp MGI:1915268 (MGI)
68018 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr13 50.58 cM Chr13:96542735-96640167 (+)
GRCm38
68018 (NCBI Gene Model)
Q9EQG9 (UniProt | EBI)
NM_023420 (RefSeq)
rat Col4a3bp 365652 (Entrez Gene)
Chr2 q12 NP_001102405 (RefSeq)
NM_001108935 (RefSeq)
chimpanzee COL4A3BP 471515 (Entrez Gene)
Chr5 XP_526893 (RefSeq)
cattle COL4A3BP 286797 (Entrez Gene)
Chr10 Q9GKI7 (UniProt | EBI)
NM_174765 (RefSeq)
dog COL4A3BP 612799 (Entrez Gene)
Chr3 XP_022272497 (RefSeq)
chicken COL4A3BP 427209 (Entrez Gene)
ChrZ XP_015133121 (RefSeq)
zebrafish col4a3bpb 797430 (Entrez Gene)
Chr21 XP_021324631 (RefSeq)
frog, western clawed col4a3bp 387331 (Entrez Gene)
Chr1 Q6P3Q6 (UniProt | EBI)
NM_203513 (RefSeq)
macaque, rhesus COL4A3BP 705834 (Entrez Gene)
Chr6 XP_014995773 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
11/14/2017
MGI 6.11
The Jackson Laboratory