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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SLC46A1 HGNC:30521 (HGNC)
113235 (Entrez Gene)
611672 (OMIM)
SLC46A1 (MyGene.info)
HGNC homology
Chr17 q11.2 Chr17:28394642-28406630 (-)
Q96NT5 (UniProt | EBI)
NM_001242366 (RefSeq)
mouse Slc46a1 MGI:1098733 (MGI)
52466 (Entrez Gene)
Gene Tree
HGNC homology
Chr11 46.74 cM Chr11:78465697-78472059 (+)
OTTMUSG00000000134 (VEGA)
OTTMUSP00000000186 (VEGA)
OTTMUST00000000430 (VEGA)
rat Slc46a1 303333 (Entrez Gene)
Chr10 q25 Q5EBA8 (UniProt | EBI)
NM_001013969 (RefSeq)
cattle SLC46A1 511097 (Entrez Gene)
Chr19 Q05B81 (UniProt | EBI)
NM_001079585 (RefSeq)
dog SLC46A1 491166 (Entrez Gene)
Chr9 XP_003435354 (RefSeq)
chicken SLC46A1 417569 (Entrez Gene)
Chr19 NP_001191995 (RefSeq)
NM_001205066 (RefSeq)
zebrafish slc46a1 393255 (Entrez Gene)
Chr15 Q7ZWG6 (UniProt | EBI)
NM_200285 (RefSeq)
frog, western clawed slc46a1 100145771 (Entrez Gene)
Chr2 NP_001120610 (RefSeq)
NM_001127138 (RefSeq)
macaque, rhesus SLC46A1 708727 (Entrez Gene)
Chr16 XP_001106954 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.12
The Jackson Laboratory