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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
41693

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SLC46A1 HGNC:30521 (HGNC)
113235 (Entrez Gene)
611672 (OMIM)
Chr17 q11.2 Chr17:28394642-28406212 (-)
GRCh38
Folate Malabsorption, Hereditary
Q96NT5 (UniProt | EBI)
NM_080669 (RefSeq)
mouse Slc46a1 MGI:1098733 (MGI)
52466 (Entrez Gene)
Gene Tree
VISTA-Point
Chr11 46.74 cM Chr11:78465697-78472059 (+)
GRCm38
OTTMUSG00000000134 (VEGA)
OTTMUSP00000000186 (VEGA)
OTTMUST00000000430 (VEGA)
rat Slc46a1 303333 (Entrez Gene)
Chr10 q25 Q5EBA8 (UniProt | EBI)
NM_001013969 (RefSeq)
rhesus macaque SLC46A1 708727 (Entrez Gene)
Chr16 XP_001106954 (RefSeq)
cattle SLC46A1 511097 (Entrez Gene)
Chr19 Q05B81 (UniProt | EBI)
NM_001079585 (RefSeq)
dog SLC46A1 491166 (Entrez Gene)
Chr9 XP_548286 (RefSeq)
chicken SLC46A1 417569 (Entrez Gene)
Chr19 NP_001191995 (RefSeq)
NM_001205066 (RefSeq)
zebrafish slc46a1 393255 (Entrez Gene)
Chr15 Q7ZWG6 (UniProt | EBI)
NM_200285 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/12/2014
MGI 5.19
The Jackson Laboratory