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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 67, Dec 12, 2012)
41614

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SPG11 HGNC:11226 (HGNC)
80208 (Entrez Gene)
610844 (OMIM)
Chr15 q14 Chr15:44562696-44663678 (-)
GRCh38
Spastic Paraplegia 11, Autosomal Recessive; SPG11
Q96JI7 (UniProt | EBI)
NM_025137 (RefSeq)
mouse Spg11 MGI:2444989 (MGI)
214585 (Entrez Gene)
Gene Tree
VISTA-Point
Chr2 60.5 cM Chr2:122053520-122118386 (-)
GRCm38
OTTMUSG00000015533 (VEGA)
OTTMUSP00000016549 (VEGA)
OTTMUST00000036886 (VEGA)
rat Spg11 311372 (Entrez Gene)
Chr3 q35 NP_001178500 (RefSeq)
NM_001191571 (RefSeq)
rhesus macaque LOC712221 712221 (Entrez Gene)
Chr7 XP_002808495 (RefSeq)
cattle SPG11 507819 (Entrez Gene)
Chr10 XP_869859 (RefSeq)
dog SPG11 100856719 (Entrez Gene)
Chr30 XP_003640073 (RefSeq)
chicken SPG11 415572 (Entrez Gene)
Chr10 XP_003641879 (RefSeq)
zebrafish spg11 793551 (Entrez Gene)
Chr25 NP_001167606 (RefSeq)
NM_001174135 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
04/08/2014
MGI 5.17
The Jackson Laboratory