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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
41559

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human MMP28 HGNC:14366 (HGNC)
79148 (Entrez Gene)
608417 (OMIM)
MMP28 (MyGene.info)
HGNC homology
Chr17 q12 Chr17:35756249-35795707 (-)
GRCh38.p7
Q9H239 (UniProt | EBI)
NM_001032278 (RefSeq)
mouse Mmp28 MGI:2153062 (MGI)
118453 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr11 50.39 cM Chr11:83440768-83463040 (-)
GRCm38
118453 (NCBI Gene Model)
NP_001307229 (RefSeq)
NM_001320300 (RefSeq)
rat LOC100912318 100912318 (Entrez Gene)
Chr10
Mmp28 303384 (Entrez Gene)
Chr10 q26 NP_001073357 (RefSeq)
NM_001079888 (RefSeq)
cattle MMP28 519276 (Entrez Gene)
Chr19 XP_024836411 (RefSeq)
dog MMP28 491136 (Entrez Gene)
Chr9 XP_022279008 (RefSeq)
chicken MMP28 417523 (Entrez Gene)
Chr19 XP_415771 (RefSeq)
zebrafish mmp28 100005670 (Entrez Gene)
Chr15 XP_001337581 (RefSeq)
frog, western clawed mmp28 100488826 (Entrez Gene)
Chr2 XP_012812903 (RefSeq)
macaque, rhesus MMP28 574250 (Entrez Gene)
Chr16 NP_001265325 (RefSeq)
NM_001278395 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
02/11/2020
MGI 6.14
The Jackson Laboratory