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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
41550

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human ASPSCR1 HGNC:13825 (HGNC)
79058 (Entrez Gene)
606236 (OMIM)
Chr17 q25.3 Chr17:81977550-82017406 (+)
GRCh38
Alveolar Soft Part Sarcoma; ASPS
Q9BZE9 (UniProt | EBI)
NM_024083 (RefSeq)
mouse Aspscr1 MGI:1916188 (MGI)
68938 (Entrez Gene)
Gene Tree
VISTA-Point
Chr11 84.41 cM Chr11:120672973-120709447 (+)
GRCm38
OTTMUSG00000004078 (VEGA)
OTTMUSP00000004448 (VEGA)
OTTMUST00000009139 (VEGA)
rat Aspscr1 691026 (Entrez Gene)
Chr10 q32.3 XP_001076577 (RefSeq)
chimpanzee ASPSCR1 468360 (Entrez Gene)
Chr17 XP_009431809 (RefSeq)
rhesus macaque LOC715326 715326 (Entrez Gene)
Chr16 XP_001112862 (RefSeq)
cattle ASPSCR1 515670 (Entrez Gene)
Chr19 NP_001098450 (RefSeq)
NM_001104980 (RefSeq)
dog ASPSCR1 475925 (Entrez Gene)
Chr9 XP_533134 (RefSeq)
chicken ASPSCR1 417384 (Entrez Gene)
Chr18 XP_415639 (RefSeq)
western clawed frog aspscr1 733865 (Entrez Gene)
ChrUN NP_001039070 (RefSeq)
NM_001045605 (RefSeq)
zebrafish aspscr1 550237 (Entrez Gene)
ChrUN NP_001017575 (RefSeq)
NM_001017575 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
11/18/2014
MGI 5.20
The Jackson Laboratory