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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SPNS1 HGNC:30621 (HGNC)
83985 (Entrez Gene)
612583 (OMIM)
HGNC homology
Chr16 p11.2 Chr16:28974767-28984769 (+)
Q9H2V7 (UniProt | EBI)
NM_001142449 (RefSeq)
mouse Spns1 MGI:1920908 (MGI)
73658 (Entrez Gene)
Gene Tree
HGNC homology
Chr7 69.01 cM Chr7:126370060-126377450 (-)
OTTMUSG00000031445 (VEGA)
OTTMUSP00000041308 (VEGA)
OTTMUST00000077915 (VEGA)
rat Spns1 361648 (Entrez Gene)
Chr1 q36 Q2YDU8 (UniProt | EBI)
NM_001039208 (RefSeq)
chimpanzee SPNS1 743259 (Entrez Gene)
Chr16 XP_024209839 (RefSeq)
cattle SPNS1 505997 (Entrez Gene)
Chr25 Q08DX7 (UniProt | EBI)
NM_001076808 (RefSeq)
dog SPNS1 100856384 (Entrez Gene)
Chr6 XP_013969994 (RefSeq)
zebrafish spns1 799873 (Entrez Gene)
Chr3 Q7ZU13 (UniProt | EBI)
NM_153663 (RefSeq)
frog, western clawed spns1 100127684 (Entrez Gene)
ChrUN A8WGF7 (UniProt | EBI)
NM_001113024 (RefSeq)
macaque, rhesus SPNS1 704769 (Entrez Gene)
Chr20 XP_001102328 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.12
The Jackson Laboratory