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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
41492

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human ATPAF1 HGNC:18803 (HGNC)
64756 (Entrez Gene)
608917 (OMIM)
ATPAF1 (MyGene.info)
HGNC homology
Chr1 p33 Chr1:46635039-46668427 (-)
GRCh38.p7
Q5TC12 (UniProt | EBI)
NM_001042546 (RefSeq)
mouse Atpaf1 MGI:2180560 (MGI)
230649 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr4 53.06 cM Chr4:115784814-115812314 (+)
GRCm38
230649 (NCBI Gene Model)
Q811I0 (UniProt | EBI)
NM_181040 (RefSeq)
rat Atpaf1 313510 (Entrez Gene)
Chr5 q35 NP_001101429 (RefSeq)
NM_001107959 (RefSeq)
chimpanzee ATPAF1 456558 (Entrez Gene)
Chr1 XP_016817973 (RefSeq)
cattle ATPAF1 505430 (Entrez Gene)
Chr3 XP_002686460 (RefSeq)
dog ATPAF1 610408 (Entrez Gene)
Chr15 XP_853001 (RefSeq)
chicken ATPAF1 424616 (Entrez Gene)
Chr8 XP_004936830 (RefSeq)
zebrafish atpaf1 550606 (Entrez Gene)
Chr22 Q1L987 (UniProt | EBI)
NM_001017907 (RefSeq)
frog, western clawed atpaf1 493432 (Entrez Gene)
Chr4 Q66JD1 (UniProt | EBI)
NM_001008069 (RefSeq)
macaque, rhesus ATPAF1 708798 (Entrez Gene)
Chr1 XP_028689931 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
10/08/2019
MGI 6.14
The Jackson Laboratory