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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
41464

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human VIPAS39 HGNC:20347 (HGNC)
63894 (Entrez Gene)
613401 (OMIM)
Chr14 q24.3-q31 Chr14:77426675-77457640 (-)
GRCh38
Arthrogryposis, Renal Dysfunction, and Cholestasis 2; ARCS2
Q9H9C1 (UniProt | EBI)
NM_022067 (RefSeq)
mouse Vipas39 MGI:2144805 (MGI)
104799 (Entrez Gene)
Gene Tree
VISTA-Point
Chr12 41.44 cM Chr12:87238875-87266286 (-)
GRCm38
ENSMUSG00000021038 (Ensembl Gene Model)
ENSMUSP00000072527 (Ensembl)
ENSMUST00000072744 (Ensembl)
rat Vipas39 681989 (Entrez Gene)
Chr6 Q5PQN6 (UniProt | EBI)
NM_001101004 (RefSeq)
chimpanzee VIPAS39 453069 (Entrez Gene)
Chr14 XP_001164812 (RefSeq)
rhesus macaque VIPAS39 706315 (Entrez Gene)
Chr7 NP_001247448 (RefSeq)
NM_001260519 (RefSeq)
cattle VIPAS39 508872 (Entrez Gene)
Chr10 A5D796 (UniProt | EBI)
NM_001098000 (RefSeq)
dog VIPAS39 490808 (Entrez Gene)
Chr8 XP_547930 (RefSeq)
chicken VIPAR 423377 (Entrez Gene)
Chr5 XP_421291 (RefSeq)
western clawed frog vipas39 100145706 (Entrez Gene)
ChrUN NP_001120552 (RefSeq)
NM_001127080 (RefSeq)
zebrafish vipas39 415096 (Entrez Gene)
Chr20 Q5TYV4 (UniProt | EBI)
NM_001001836 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/09/2014
MGI 5.20
The Jackson Laboratory