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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
41429

 
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human PRUNE1 HGNC:13420 (HGNC)
58497 (Entrez Gene)
617413 (OMIM)
HGNC homology
Chr1 q21.3 Chr1:151008391-151035713 (+)
GRCh38.p7
Q86TP1 (UniProt | EBI)
NM_001303229 (RefSeq)
mouse Prune1 MGI:1925152 (MGI)
229589 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr3 40.74 cM Chr3:95253674-95282076 (-)
GRCm38
OTTMUSG00000022362 (VEGA)
OTTMUSP00000025382 (VEGA)
OTTMUST00000053379 (VEGA)
rat Prune1 310664 (Entrez Gene)
Chr2 q34 Q6AYG3 (UniProt | EBI)
NM_001007697 (RefSeq)
cattle PRUNE1 524973 (Entrez Gene)
Chr3 Q5E9Y6 (UniProt | EBI)
NM_001035352 (RefSeq)
dog PRUNE1 483189 (Entrez Gene)
Chr17 XP_013976116 (RefSeq)
chicken LOC100857290 100857290 (Entrez Gene)
Chr25
PRUNE1 427053 (Entrez Gene)
Chr25 XP_003642731 (RefSeq)
zebrafish prune 563343 (Entrez Gene)
Chr16 NP_001153766 (RefSeq)
NM_001160294 (RefSeq)
frog, western clawed prune1 100379763 (Entrez Gene)
Chr8 XP_012825337 (RefSeq)
macaque, rhesus PRUNE1 708898 (Entrez Gene)
Chr1 XP_015007357 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
11/14/2017
MGI 6.11
The Jackson Laboratory