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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
41216

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SOBP HGNC:29256 (HGNC)
55084 (Entrez Gene)
613667 (OMIM)
Chr6 q21 Chr6:107490113-107661309 (+)
GRCh38
Mental Retardation, Anterior Maxillary Protrusion, and Strabismus;
A7XYQ1 (UniProt | EBI)
NM_018013 (RefSeq)
mouse Sobp MGI:1924427 (MGI)
109205 (Entrez Gene)
Gene Tree
VISTA-Point
Chr10 22.89 cM Chr10:43002501-43174530 (-)
GRCm38
ENSMUSG00000038248 (Ensembl Gene Model)
ENSMUSP00000040072 (Ensembl)
ENSMUST00000040275 (Ensembl)
rat Sobp 309860 (Entrez Gene)
Chr20 q13 A7XYI6 (UniProt | EBI)
NM_001104640 (RefSeq)
chimpanzee SOBP 462914 (Entrez Gene)
Chr6 XP_003950979 (RefSeq)
rhesus macaque SOBP 698484 (Entrez Gene)
Chr4 NP_001098004 (RefSeq)
NM_001104534 (RefSeq)
cattle SOBP 537433 (Entrez Gene)
Chr9 A7XYH9 (UniProt | EBI)
NM_001101170 (RefSeq)
dog SOBP 612126 (Entrez Gene)
Chr12 XP_005627839 (RefSeq)
chicken SOBP 421775 (Entrez Gene)
Chr3 A7XYH5 (UniProt | EBI)
NM_001110177 (RefSeq)
zebrafish sobpa 573683 (Entrez Gene)
Chr13 A5X7A0 (UniProt | EBI)
NM_001098618 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory