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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SOX3 HGNC:11199 (HGNC)
6658 (Entrez Gene)
313430 (OMIM)
SOX3 (MyGene.info)
HGNC homology
ChrX q27.1 ChrX:140502987-140505060 (-)
P41225 (UniProt | EBI)
NM_005634 (RefSeq)
mouse Sox3 MGI:98365 (MGI)
20675 (Entrez Gene)
Gene Tree
HGNC homology
ChrX 33.66 cM ChrX:60891366-60893430 (-)
OTTMUSG00000017611 (VEGA)
OTTMUSP00000019219 (VEGA)
OTTMUST00000042794 (VEGA)
dog SOX3 492178 (Entrez Gene)
ChrX XP_852934 (RefSeq)
chicken SOX3 374019 (Entrez Gene)
Chr4 P48433 (UniProt | EBI)
NM_204195 (RefSeq)
zebrafish sox3 30529 (Entrez Gene)
Chr14 Q6EJB7 (UniProt | EBI)
NM_001001811 (RefSeq)
frog, western clawed sox3 493228 (Entrez Gene)
Chr8 Q68FA4 (UniProt | EBI)
NM_001007501 (RefSeq)
macaque, rhesus SOX3 696412 (Entrez Gene)
ChrX NP_001180681 (RefSeq)
NM_001193752 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.11
The Jackson Laboratory