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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
4113

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SLC6A8 HGNC:11055 (HGNC)
6535 (Entrez Gene)
300036 (OMIM)
HGNC homology
ChrX q28 ChrX:153688297-153696593 (+)
GRCh38.p2
Cerebral Creatine Deficiency Syndrome 1; CCDS1
P48029 (UniProt | EBI)
NM_005629 (RefSeq)
mouse Slc6a8 MGI:2147834 (MGI)
102857 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
ChrX 37.38 cM ChrX:73673150-73682502 (+)
GRCm38
Cerebral Creatine Deficiency Syndrome 1; CCDS1
OTTMUSG00000017696 (VEGA)
OTTMUSP00000019279 (VEGA)
OTTMUST00000042894 (VEGA)
rat Slc6a8 50690 (Entrez Gene)
ChrX P28570 (UniProt | EBI)
NM_017348 (RefSeq)
chimpanzee LOC473853 473853 (Entrez Gene)
ChrX XP_016803163 (RefSeq)
rhesus macaque SLC6A8 698307 (Entrez Gene)
ChrX NP_001253205 (RefSeq)
NM_001266276 (RefSeq)
cattle SLC6A8 282367 (Entrez Gene)
ChrX O18875 (UniProt | EBI)
NM_174611 (RefSeq)
dog SLC6A8 492242 (Entrez Gene)
ChrX XP_005642051 (RefSeq)
zebrafish slc6a8 567544 (Entrez Gene)
Chr8 NP_001314797 (RefSeq)
NM_001327868 (RefSeq)
frog, western clawed slc6a8 100489909 (Entrez Gene)
Chr8 XP_004916750 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/27/2016
MGI 6.05
The Jackson Laboratory