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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
41023

 
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human TTC28 HGNC:29179 (HGNC)
23331 (Entrez Gene)
615098 (OMIM)
TTC28 (gene) (MyGene.info)
HGNC homology
Chr22 q12.1 Chr22:27978014-28679865 (-)
GRCh38.p7
Q96AY4 (UniProt | EBI)
NM_015281 (RefSeq)
mouse Ttc28 MGI:2140873 (MGI)
209683 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr5 53.74 cM Chr5:110879803-111289780 (+)
GRCm38
ENSMUSG00000033209 (Ensembl Gene Model)
ENSMUSP00000136116 (Ensembl)
ENSMUST00000040111 (Ensembl)
rat Ttc28 304558 (Entrez Gene)
Chr12 q16 XP_006249646 (RefSeq)
chimpanzee TTC28 458732 (Entrez Gene)
Chr22 XP_001172489 (RefSeq)
cattle TTC28 537659 (Entrez Gene)
Chr17 XP_024833576 (RefSeq)
dog TTC28 486337 (Entrez Gene)
Chr26 XP_005636444 (RefSeq)
chicken TTC28 416914 (Entrez Gene)
Chr15 XP_015130973 (RefSeq)
zebrafish ttc28 100331958 (Entrez Gene)
Chr10 XP_017213483 (RefSeq)
frog, western clawed ttc28 100485210 (Entrez Gene)
Chr1 XP_004910665 (RefSeq)
macaque, rhesus TTC28 717025 (Entrez Gene)
Chr10 XP_028683734 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
10/08/2019
MGI 6.14
The Jackson Laboratory