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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
41009

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SMC5 HGNC:20465 (HGNC)
23137 (Entrez Gene)
609386 (OMIM)
SMC5 (MyGene.info)
HGNC homology
Chr9 q21.12 Chr9:70258962-70354873 (+)
GRCh38.p7
Q8IY18 (UniProt | EBI)
NM_015110 (RefSeq)
mouse Smc5 MGI:2385088 (MGI)
226026 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr19 18.04 cM Chr19:23206451-23273897 (-)
GRCm38
ENSMUSG00000024943 (Ensembl Gene Model)
ENSMUSP00000084837 (Ensembl)
ENSMUST00000087556 (Ensembl)
rat Smc5 293967 (Entrez Gene)
Chr1 q51 NP_001099827 (RefSeq)
NM_001106357 (RefSeq)
chimpanzee SMC5 464519 (Entrez Gene)
Chr9 XP_016816434 (RefSeq)
cattle SMC5 508938 (Entrez Gene)
Chr8 XP_024851939 (RefSeq)
dog SMC5 476327 (Entrez Gene)
Chr1 XP_533529 (RefSeq)
chicken SMC5 431608 (Entrez Gene)
ChrZ Q5ZJY5 (UniProt | EBI)
NM_001039335 (RefSeq)
zebrafish smc5 566749 (Entrez Gene)
Chr10 NP_001180470 (RefSeq)
NM_001077572 (RefSeq)
frog, western clawed smc5 100485531 (Entrez Gene)
Chr1 XP_017944874 (RefSeq)
macaque, rhesus SMC5 702219 (Entrez Gene)
Chr15 XP_014973354 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
07/29/2020
MGI 6.15
The Jackson Laboratory