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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
40959

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SLC40A1 HGNC:10909 (HGNC)
30061 (Entrez Gene)
604653 (OMIM)
Chr2 q32 Chr2:189560590-189583752 (-)
GRCh38
Hemochromatosis, Type 4; HFE4
Q9NP59 (UniProt | EBI)
NM_014585 (RefSeq)
mouse Slc40a1 MGI:1315204 (MGI)
53945 (Entrez Gene)
Gene Tree
VISTA-Point
Chr1 23.96 cM Chr1:45908068-45926523 (-)
GRCm38
Hemochromatosis, Type 4; HFE4
OTTMUSG00000046528 (VEGA)
OTTMUSP00000066830 (VEGA)
OTTMUST00000121040 (VEGA)
rat Slc40a1 170840 (Entrez Gene)
Chr9 q22 Q923U9 (UniProt | EBI)
NM_133315 (RefSeq)
chimpanzee SLC40A1 459821 (Entrez Gene)
Chr2B XP_001165179 (RefSeq)
rhesus macaque SLC40A1 713321 (Entrez Gene)
Chr12 XP_002808055 (RefSeq)
cattle SLC40A1 527023 (Entrez Gene)
Chr2 NP_001071438 (RefSeq)
NM_001077970 (RefSeq)
dog SLC40A1 478837 (Entrez Gene)
Chr37 XP_535999 (RefSeq)
chicken SLC40A1 423984 (Entrez Gene)
Chr7 NP_001012931 (RefSeq)
NM_001012913 (RefSeq)
western clawed frog slc40a1 100036732 (Entrez Gene)
ChrUN NP_001090746 (RefSeq)
NM_001097277 (RefSeq)
zebrafish slc40a1 58153 (Entrez Gene)
Chr9 Q9I9R3 (UniProt | EBI)
NM_131629 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/26/2014
MGI 5.19
The Jackson Laboratory