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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
40858

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human ATXN10 HGNC:10549 (HGNC)
25814 (Entrez Gene)
611150 (OMIM)
Chr22 q13.31 Chr22:45671798-45845307 (+)
GRCh38
Spinocerebellar Ataxia 10; SCA10
Q9UBB4 (UniProt | EBI)
NM_013236 (RefSeq)
mouse Atxn10 MGI:1859293 (MGI)
54138 (Entrez Gene)
Gene Tree
VISTA-Point
Chr15 40.32 cM Chr15:85336381-85463836 (+)
GRCm38
54138 (NCBI Gene Model)
P28658 (UniProt | EBI)
NM_016843 (RefSeq)
rat Atxn10 170821 (Entrez Gene)
Chr7 q34 Q9ER24 (UniProt | EBI)
NM_133313 (RefSeq)
chimpanzee ATXN10 470238 (Entrez Gene)
Chr22 NP_001267402 (RefSeq)
NM_001280473 (RefSeq)
rhesus macaque ATXN10 713805 (Entrez Gene)
Chr10 NP_001247674 (RefSeq)
NM_001260745 (RefSeq)
cattle ATXN10 767990 (Entrez Gene)
Chr5 Q2TBW0 (UniProt | EBI)
NM_001077051 (RefSeq)
dog ATXN10 474467 (Entrez Gene)
Chr10 XP_531697 (RefSeq)
chicken ATXN10 418245 (Entrez Gene)
Chr1 XP_416469 (RefSeq)
western clawed frog atxn10 548542 (Entrez Gene)
ChrUN Q5FVB0 (UniProt | EBI)
NM_001015825 (RefSeq)
zebrafish atxn10 100034473 (Entrez Gene)
Chr4 NP_001124084 (RefSeq)
NM_001130612 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory