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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
40855

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SLC30A2 HGNC:11013 (HGNC)
7780 (Entrez Gene)
609617 (OMIM)
Chr1 p35.3 Chr1:26038023-26046113 (-)
GRCh38
Zinc Deficiency, Transient Neonatal; TNZD
Q9BRI3 (UniProt | EBI)
NM_001004434 (RefSeq)
mouse Slc30a2 MGI:106637 (MGI)
230810 (Entrez Gene)
Gene Tree
VISTA-Point
Chr4 66.61 cM Chr4:134343181-134354484 (+)
GRCm38
OTTMUSG00000010829 (VEGA)
OTTMUSP00000011613 (VEGA)
OTTMUST00000025324 (VEGA)
rat Slc30a2 25362 (Entrez Gene)
Chr5 q36 Q62941 (UniProt | EBI)
NM_012890 (RefSeq)
chimpanzee SLC30A2 469239 (Entrez Gene)
Chr1 XP_524624 (RefSeq)
rhesus macaque SLC30A2 713732 (Entrez Gene)
Chr1 XP_001108252 (RefSeq)
cattle SLC30A2 511061 (Entrez Gene)
Chr2 NP_001178425 (RefSeq)
NM_001191496 (RefSeq)
dog SLC30A2 478173 (Entrez Gene)
Chr2 XP_535347 (RefSeq)
chicken SLC30A2 425575 (Entrez Gene)
Chr23 XP_003642614 (RefSeq)
western clawed frog slc30a2 448552 (Entrez Gene)
ChrUN NP_001006823 (RefSeq)
NM_001006822 (RefSeq)
zebrafish slc30a2 563540 (Entrez Gene)
Chr20 NP_001038485 (RefSeq)
NM_001045020 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/16/2014
MGI 5.20
The Jackson Laboratory