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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
40775

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human CIRH1A HGNC:1983 (HGNC)
84916 (Entrez Gene)
607456 (OMIM)
Chr16 q22.1 Chr16:69132596-69169034 (+)
GRCh38
North American Indian Childhood Cirrhosis; NAIC
Q969X6 (UniProt | EBI)
NM_032830 (RefSeq)
mouse Cirh1a MGI:1096573 (MGI)
21771 (Entrez Gene)
Gene Tree
VISTA-Point
Chr8 53.32 cM Chr8:106893640-106923093 (+)
GRCm38
ENSMUSG00000041438 (Ensembl Gene Model)
ENSMUSP00000048377 (Ensembl)
ENSMUST00000047629 (Ensembl)
rat Cirh1a 291987 (Entrez Gene)
Chr19 q12 NP_001009640 (RefSeq)
NM_001009640 (RefSeq)
chimpanzee CIRH1A 454197 (Entrez Gene)
Chr16 NP_001267030 (RefSeq)
NM_001280101 (RefSeq)
rhesus macaque CIRH1A 705036 (Entrez Gene)
Chr20 XP_001093408 (RefSeq)
cattle CIRH1A 510315 (Entrez Gene)
Chr18 NP_001192601 (RefSeq)
NM_001205672 (RefSeq)
dog CIRH1A 489738 (Entrez Gene)
Chr5 XP_546858 (RefSeq)
chicken CIRH1A 769632 (Entrez Gene)
Chr11 XP_001232920 (RefSeq)
western clawed frog cirh1a 733991 (Entrez Gene)
ChrUN NP_001039163 (RefSeq)
NM_001045698 (RefSeq)
zebrafish cirh1a 406571 (Entrez Gene)
Chr18 NP_998447 (RefSeq)
NM_213282 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/09/2014
MGI 5.20
The Jackson Laboratory