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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
40726

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human HOXA5 HGNC:5106 (HGNC)
3202 (Entrez Gene)
142952 (OMIM)
HOXA5 (MyGene.info)
HGNC homology
Chr7 p15.2 Chr7:27141052-27143668 (-)
GRCh38.p7
P20719 (UniProt | EBI)
NM_019102 (RefSeq)
mouse Hoxa5 MGI:96177 (MGI)
15402 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr6 25.4 cM Chr6:52201754-52204587 (-)
GRCm38
15402 (NCBI Gene Model)
P09021 (UniProt | EBI)
NM_010453 (RefSeq)
rat Hoxa5 79241 (Entrez Gene)
Chr4 q24 P52949 (UniProt | EBI)
NM_024389 (RefSeq)
LOC100909641 100909641 (Entrez Gene)
Chr4
LOC100911546 100911546 (Entrez Gene)
Chr4
chimpanzee HOXA5 463310 (Entrez Gene)
Chr7 XP_519011 (RefSeq)
cattle HOXA5 768039 (Entrez Gene)
Chr4 Q2HJ67 (UniProt | EBI)
NM_001077098 (RefSeq)
dog HOXA5 482370 (Entrez Gene)
Chr14 XP_539487 (RefSeq)
chicken HOX1 100858834 (Entrez Gene)
Chr2
HOXA5 100858404 (Entrez Gene)
Chr2 Q6B3N0 (UniProt | EBI)
NM_001318419 (RefSeq)
LOC100857257 100857257 (Entrez Gene)
Chr2
zebrafish hoxa5a 58055 (Entrez Gene)
Chr19 Q9YGT6 (UniProt | EBI)
NM_131540 (RefSeq)
frog, western clawed hoxa5 496880 (Entrez Gene)
Chr6 NP_001011405 (RefSeq)
NM_001011405 (RefSeq)
macaque, rhesus HOXA5 700221 (Entrez Gene)
Chr3 XP_014989318 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
11/12/2019
MGI 6.14
The Jackson Laboratory