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HomoloGene Vertebrate Homology
Class ID
HomoloGene (Release 68, May 6, 2014)

MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human OPN3 HGNC:14007 (HGNC)
23596 (Entrez Gene)
606695 (OMIM)
OPN3 (MyGene.info)
HGNC homology
Chr1 q43 Chr1:241593150-241640399 (-)
Q9H1Y3 (UniProt | EBI)
NM_014322 (RefSeq)
mouse Opn3 MGI:1338022 (MGI)
13603 (Entrez Gene)
Gene Tree
HGNC homology
Chr1 81.66 cM Chr1:175662421-175692776 (-)
ENSMUSG00000026525 (Ensembl Gene Model)
ENSMUSP00000027809 (Ensembl)
ENSMUST00000027809 (Ensembl)
rat Opn3 498289 (Entrez Gene)
Chr13 q25 NP_001178862 (RefSeq)
NM_001191933 (RefSeq)
chimpanzee OPN3 457854 (Entrez Gene)
Chr1 XP_016797203 (RefSeq)
cattle OPN3 100847752 (Entrez Gene)
Chr16 XP_024832324 (RefSeq)
dog OPN3 102155438 (Entrez Gene)
Chr7 XP_013970485 (RefSeq)
chicken OPN3 428582 (Entrez Gene)
Chr3 XP_426139 (RefSeq)
zebrafish opn3 561815 (Entrez Gene)
Chr13 NP_001104634 (RefSeq)
NM_001111164 (RefSeq)
frog, western clawed opn3 100494279 (Entrez Gene)
Chr1 XP_017946446 (RefSeq)
macaque, rhesus OPN3 707436 (Entrez Gene)
Chr1 XP_001094239 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
MGI 6.13
The Jackson Laboratory