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HomoloGene Vertebrate Homology
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
4068

Comparative GO Graph (mouse, human, rat)  
MGI HomoloGene Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human LHX1 HGNC:6593 (HGNC)
3975 (Entrez Gene)
601999 (OMIM)
LHX1 (MyGene.info)
HGNC homology
Chr17 q12 Chr17:36937475-36944615 (+)
GRCh38.p7
P48742 (UniProt | EBI)
NM_005568 (RefSeq)
mouse Lhx1 MGI:99783 (MGI)
16869 (Entrez Gene)
Gene Tree
VISTA-Point
HGNC homology
Chr11 51.31 cM Chr11:84519379-84525534 (-)
GRCm38
16869 (NCBI Gene Model)
P63006 (UniProt | EBI)
NM_008498 (RefSeq)
rat Lhx1 257634 (Entrez Gene)
Chr10 q26 P63007 (UniProt | EBI)
NM_145880 (RefSeq)
chimpanzee LHX1 454600 (Entrez Gene)
Chr17 Q5IS44 (UniProt | EBI)
NM_001033916 (RefSeq)
cattle LHX1 786041 (Entrez Gene)
Chr19 NP_001098917 (RefSeq)
NM_001105447 (RefSeq)
dog LHX1 100856649 (Entrez Gene)
Chr9 XP_013972209 (RefSeq)
chicken LHX1 396381 (Entrez Gene)
Chr19 P53411 (UniProt | EBI)
NM_205413 (RefSeq)
zebrafish lhx1a 30463 (Entrez Gene)
Chr15 Q90476 (UniProt | EBI)
NM_131216 (RefSeq)
frog, western clawed lhx1 100101708 (Entrez Gene)
Chr2 NP_001093698 (RefSeq)
NM_001100228 (RefSeq)
MGI HomoloGene Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
08/13/2019
MGI 6.14
The Jackson Laboratory