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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
4033

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human HOXA11 HGNC:5101 (HGNC)
3207 (Entrez Gene)
142958 (OMIM)
Chr7 p15.2 Chr7:27181157-27185216 (-)
GRCh38
Radioulnar Synostosis with Amegakaryocytic Thrombocytopenia; RUSAT
P31270 (UniProt | EBI)
NM_005523 (RefSeq)
mouse Hoxa11 MGI:96172 (MGI)
15396 (Entrez Gene)
Gene Tree
VISTA-Point
Chr6 25.4 cM Chr6:52242106-52245810 (-)
GRCm38
OTTMUSG00000018883 (VEGA)
OTTMUSP00000020426 (VEGA)
OTTMUST00000045416 (VEGA)
rat Hoxa11 368057 (Entrez Gene)
Chr4 q24 NP_001123350 (RefSeq)
NM_001129878 (RefSeq)
LOC100909443 100909443 (Entrez Gene)
Chr4 XP_003749800 (RefSeq)
LOC100911743 100911743 (Entrez Gene)
Chr4 XP_003752232 (RefSeq)
chimpanzee HOXA11 463312 (Entrez Gene)
Chr7 XP_519012 (RefSeq)
rhesus macaque LOC704713 704713 (Entrez Gene)
Chr3 XP_001093087 (RefSeq)
cattle HOXA11 100336578 (Entrez Gene)
Chr4 XP_002686900 (RefSeq)
dog HOXA11 100683897 (Entrez Gene)
Chr14 XP_003431971 (RefSeq)
chicken HOXA11 395327 (Entrez Gene)
Chr2 P31258 (UniProt | EBI)
NM_204619 (RefSeq)
LOC100858967 100858967 (Entrez Gene)
Chr2 XP_003640756 (RefSeq)
LOC100859078 100859078 (Entrez Gene)
Chr2 XP_003640763 (RefSeq)
western clawed frog hoxa11 101733863 (Entrez Gene)
ChrUN XP_004915452 (RefSeq)
zebrafish hoxa11b 30382 (Entrez Gene)
Chr16 Q9DDU1 (UniProt | EBI)
NM_131147 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory