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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
39965

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human SIGMAR1 HGNC:8157 (HGNC)
10280 (Entrez Gene)
601978 (OMIM)
Chr9 p13.3 Chr9:34634722-34637826 (-)
GRCh38
Amyotrophic Lateral Sclerosis 16, Juvenile; ALS16
Q99720 (UniProt | EBI)
NM_005866 (RefSeq)
mouse Sigmar1 MGI:1195268 (MGI)
18391 (Entrez Gene)
Gene Tree
VISTA-Point
Chr4 22.05 cM Chr4:41738493-41756157 (-)
GRCm38
OTTMUSG00000006675 (VEGA)
OTTMUSP00000007061 (VEGA)
OTTMUST00000015282 (VEGA)
rat Sigmar1 29336 (Entrez Gene)
Chr5 q22 Q9R0C9 (UniProt | EBI)
NM_030996 (RefSeq)
chimpanzee SIGMAR1 465062 (Entrez Gene)
Chr9 XP_001163780 (RefSeq)
rhesus macaque SIGMAR1 700469 (Entrez Gene)
Chr15 NP_001244806 (RefSeq)
NM_001257877 (RefSeq)
cattle SIGMAR1 538903 (Entrez Gene)
Chr8 Q58DH7 (UniProt | EBI)
NM_001034655 (RefSeq)
dog SIGMAR1 481587 (Entrez Gene)
Chr11 XP_852544 (RefSeq)
chicken SIGMAR1 100859748 (Entrez Gene)
ChrZ Q5ZL84 (UniProt | EBI)
NM_001270557 (RefSeq)
zebrafish sigmar1 393952 (Entrez Gene)
Chr10 Q7ZWG9 (UniProt | EBI)
NM_200977 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory