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Vertebrate Homology Class
Source
Class ID
HomoloGene (Release 68, May 6, 2014)
39963

Comparative GO Graph (mouse, human, rat)  
MGI Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human VTI1A HGNC:17792 (HGNC)
143187 (Entrez Gene)
614316 (OMIM)
Chr10 q25.2 Chr10:112446998-112855364 (+)
GRCh38
Q96AJ9 (UniProt | EBI)
NM_145206 (RefSeq)
mouse Vti1a MGI:1855699 (MGI)
53611 (Entrez Gene)
Gene Tree
VISTA-Point
Chr19 51.35 cM Chr19:55316351-55626561 (+)
GRCm38
ENSMUSG00000024983 (Ensembl Gene Model)
ENSMUSP00000093644 (Ensembl)
ENSMUST00000095950 (Ensembl)
rat Vti1a 65277 (Entrez Gene)
Chr1 q55 Q9JI51 (UniProt | EBI)
NM_023101 (RefSeq)
chimpanzee VTI1A 738194 (Entrez Gene)
Chr10 XP_001147118 (RefSeq)
cattle VTI1A 780850 (Entrez Gene)
Chr26 NP_001073260 (RefSeq)
NM_001079792 (RefSeq)
dog VTI1A 100685447 (Entrez Gene)
Chr28 XP_003433671 (RefSeq)
chicken VTI1A 770885 (Entrez Gene)
Chr6 NP_001264329 (RefSeq)
NM_001277400 (RefSeq)
western clawed frog vti1a 779677 (Entrez Gene)
ChrUN NP_001072230 (RefSeq)
NM_001078762 (RefSeq)
zebrafish vti1a 567385 (Entrez Gene)
Chr12 NP_001030152 (RefSeq)
NM_001034980 (RefSeq)
MGI Homology Information

MGI loads vertebrate homology data from NCBI HomoloGene, which programmatically detects homologs among the genome features of completely sequenced eukaryotic genomes (see: HomoloGene Build Procedure).

MGI includes homology for the following selected vertebrate species from HomoloGene:
 - human
 - mouse
 - rat
 - cattle
 - chicken
 - chimpanzee
 - dog
 - monkey, Rhesus
 - western clawed frog (Xenopus tropicalis)
 - zebrafish

These are a subset of the total species represented in HomoloGene Classes at NCBI.
Additional species may be present in an NCBI HomoloGene Class than appear in MGI.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/09/2014
MGI 5.20
The Jackson Laboratory